Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein duf3307 | SHLA_34c000390 | Not Available | + | 7140391 - 7140717 | 11786.9 |
| hydrogen peroxide-inducible activator | SHLA_34c000400 | Not Available | - | 7140745 - 7141644 | 32481.7 |
| catalase-peroxidase katg | SHLA_34c000410 | Not Available | + | 7141813 - 7143987 | 78705.4 |
| hypothetical protein | SHLA_34c000420 | Not Available | - | 7144089 - 7144268 | 6289.37 |
| fe(3+) ions import atp-binding protein fbpc 1 | SHLA_34c000430 | Not Available | - | 7144364 - 7145395 | 37014.9 |
| abc-type fe3+ transport system, permease component | SHLA_34c000440 | Not Available | - | 7145383 - 7147077 | 59518.9 |
| abc-type fe3+ transport system, periplasmic component | SHLA_34c000450 | Not Available | - | 7147095 - 7148072 | 33851.4 |
| hypothetical protein | SHLA_34c000460 | Not Available | + | 7148478 - 7149368 | 30310.6 |
| hypothetical protein | SHLA_34c000470 | Not Available | - | 7149476 - 7150210 | 26151.1 |
| hypothetical protein | SHLA_34c000480 | Not Available | - | 7150322 - 7150555 | 8620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.