Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_34c000290 | Not Available | + | 7129931 - 7130149 | 8146.45 |
| hypothetical protein | SHLA_34c000300 | Not Available | + | 7130255 - 7130458 | 7995.45 |
| acetytransferase | SHLA_34c000310 | Not Available | - | 7130564 - 7131172 | 22328.9 |
| hth-type transcriptional regulator cdhr | SHLA_34c000320 | Not Available | + | 7131471 - 7132478 | 37510.1 |
| diguanylate cyclase | SHLA_34c000330 | Not Available | - | 7132517 - 7133761 | 45785.0 |
| response regulator | SHLA_34c000340 | Not Available | - | 7133983 - 7134810 | 30821.1 |
| hypothetical protein | SHLA_34c000350 | Not Available | - | 7134997 - 7135263 | 9043.15 |
| mechanosensitive ion channel mscs | SHLA_34c000360 | Not Available | - | 7135408 - 7137885 | 88945.8 |
| hypothetical protein | SHLA_34c000370 | Not Available | - | 7137990 - 7138547 | 21322.9 |
| putative calcium-binding protein | SHLA_34c000380 | Not Available | + | 7138700 - 7140097 | 49108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.