Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase dapa | SHLA_14c000960 | Not Available | + | 437963 - 438847 | 31020.1 |
| ssra-binding protein smpb | SHLA_14c000970 | Not Available | + | 438849 - 439328 | 18594.5 |
| hypothetical protein | SHLA_14c000980 | Not Available | - | 439358 - 439834 | 16126.7 |
| hypothetical protein | SHLA_14c000990 | Not Available | - | 440090 - 440665 | 21870.1 |
| dna-directed rna polymerase subunit omega | SHLA_14c001000 | Not Available | + | 441077 - 441481 | 14823.2 |
| gtp pyrophosphokinase rsh | SHLA_14c001010 | Not Available | + | 441592 - 443820 | 83503.3 |
| hypothetical protein duf3563 | SHLA_14c001020 | Not Available | + | 443991 - 444143 | 6101.43 |
| hypothetical protein | SHLA_14c001030 | Not Available | + | 444250 - 444843 | 21285.6 |
| holo-[acyl-carrier-protein] synthase acps | SHLA_14c001040 | Not Available | + | 444840 - 445250 | 14803.0 |
| signal peptidase i | SHLA_14c001050 | Not Available | + | 445318 - 446088 | 29051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.