Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formyl transferase domain-containing protein | SHLA_34c000190 | Not Available | + | 7121528 - 7122310 | 28917.3 |
| hypothetical protein | SHLA_34c000200 | Not Available | + | 7122519 - 7122821 | 11157.2 |
| methylene-tetrahydrofolate reductase | SHLA_34c000210 | Not Available | + | 7122814 - 7123401 | 21556.1 |
| 5,10-methylenetetrahydrofolate reductase | SHLA_34c000220 | Not Available | + | 7123405 - 7124499 | 40156.5 |
| 5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase acse | SHLA_34c000230 | Not Available | + | 7124590 - 7125582 | 34663.9 |
| phasin protein | SHLA_34c000240 | Not Available | + | 7125609 - 7125842 | 8103.92 |
| hypothetical protein | SHLA_34c000250 | Not Available | + | 7125879 - 7127951 | 74890.5 |
| hypothetical protein | SHLA_34c000260 | Not Available | + | 7128138 - 7128446 | 11186.8 |
| hypothetical protein | SHLA_34c000270 | Not Available | + | 7128461 - 7128859 | 14011.3 |
| transcriptional regulator | SHLA_34c000280 | Not Available | - | 7128897 - 7129814 | 33769.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.