Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator dgdr | SHLA_34c000090 | Not Available | - | 7112211 - 7113125 | 33051.8 |
| hypothetical protein | SHLA_34c000100 | Not Available | + | 7113193 - 7113492 | 11234.6 |
| hypothetical protein | SHLA_34c000110 | Not Available | - | 7113549 - 7115720 | 76544.1 |
| putative rna polymerase sigma factor | SHLA_34c000120 | Not Available | - | 7115735 - 7116256 | 19489.9 |
| hypothetical protein | SHLA_34c000130 | Not Available | - | 7116336 - 7117079 | 26896.6 |
| ferredoxin | SHLA_34c000140 | Not Available | - | 7117128 - 7117811 | 24309.1 |
| trimethylamine methyltransferase mttb | SHLA_34c000150 | Not Available | - | 7117919 - 7119502 | 57377.1 |
| dimethylamine corrinoid protein mtbc | SHLA_34c000160 | Not Available | + | 7119873 - 7120568 | 25192.7 |
| entericidin ecna/b family | SHLA_34c000170 | Not Available | - | 7120617 - 7120775 | 5409.57 |
| hypothetical protein duf1638 | SHLA_34c000180 | Not Available | + | 7120790 - 7121431 | 23597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.