Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_8c001430 | Not Available | + | 7102831 - 7103427 | 20281.7 |
| camp-binding protein | SHLA_8c001440 | Not Available | + | 7103622 - 7104353 | 27075.7 |
| putative addiction module antidote protein, cc2985 family | SHLA_8c001450 | Not Available | + | 7104839 - 7105093 | 9352.95 |
| glycine betaine/carnitine transport permease protein gbub | SHLA_34c000020 | Not Available | + | 7106099 - 7107010 | 32883.7 |
| glycine betaine transport atp-binding protein opuaa | SHLA_34c000030 | Not Available | + | 7107003 - 7108046 | 37863.1 |
| methionine synthase i | SHLA_34c000040 | Not Available | + | 7108350 - 7109363 | 35259.1 |
| hypothetical protein | SHLA_34c000050 | Not Available | - | 7109402 - 7109821 | 14978.2 |
| aspartate aminotransferase aspc | SHLA_34c000060 | Not Available | - | 7109974 - 7111107 | 41745.0 |
| hypothetical protein | SHLA_34c000070 | Not Available | - | 7111104 - 7111751 | 23352.6 |
| hypothetical protein | SHLA_34c000080 | Not Available | + | 7111879 - 7112226 | 12536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.