Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_8c001230 | Not Available | + | 7089857 - 7090543 | 25421.9 |
| putative 3-methyladenine dna glycosylase | SHLA_8c001240 | Not Available | + | 7090571 - 7091113 | 19474.4 |
| hypothetical protein | SHLA_8c001250 | Not Available | - | 7091123 - 7092616 | 54719.7 |
| blue-light-activated protein | SHLA_8c001260 | Not Available | - | 7092759 - 7094117 | 49910.1 |
| pas domain-containing s-box protein | SHLA_8c001270 | Not Available | - | 7094065 - 7094706 | 24038.2 |
| hypothetical protein | SHLA_8c001280 | Not Available | + | 7094972 - 7095259 | 10436.3 |
| hypothetical protein | SHLA_8c001290 | Not Available | + | 7095409 - 7095672 | 9555.35 |
| hypothetical protein | SHLA_8c001300 | Not Available | + | 7095683 - 7096429 | 26875.1 |
| short chain alcohol dehydrogenase | SHLA_8c001310 | Not Available | + | 7096441 - 7097406 | 34201.7 |
| hypothetical protein | SHLA_8c001320 | Not Available | - | 7097571 - 7098071 | 18350.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.