Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative dna topoisomerase i protein | SHLA_8c001130 | Not Available | + | 7079691 - 7080761 | 39792.0 |
| dehydrogenase | SHLA_8c001140 | Not Available | + | 7080976 - 7081554 | 20080.0 |
| putative dna-binding protein | SHLA_8c001150 | Not Available | + | 7081628 - 7082068 | 15966.3 |
| hypothetical protein | SHLA_8c001160 | Not Available | + | 7082090 - 7082311 | 8244.99 |
| hypothetical protein | SHLA_8c001170 | Not Available | + | 7082311 - 7083108 | 29888.9 |
| atp-dependent dna ligase ligd phosphoesterase | SHLA_8c001180 | Not Available | - | 7083109 - 7085652 | 93910.1 |
| ku protein | SHLA_8c001190 | Not Available | - | 7085655 - 7086506 | 31362.6 |
| phospholipase d/transphosphatidylase | SHLA_8c001200 | Not Available | + | 7086642 - 7088216 | 57624.4 |
| hypothetical protein | SHLA_8c001210 | Not Available | - | 7088114 - 7089046 | 32322.2 |
| metal-dependent hydrolase | SHLA_8c001220 | Not Available | + | 7089132 - 7089857 | 26479.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.