Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase dapb | SHLA_8c000730 | Not Available | - | 7038408 - 7039151 | 26435.7 |
| sulfoacetaldehyde dehydrogenase safd | SHLA_8c000740 | Not Available | - | 7039163 - 7040563 | 48533.3 |
| putative opine oxidase subunit a-like dehydrogenase | SHLA_8c000750 | Not Available | - | 7040578 - 7041915 | 46671.6 |
| anaerobic dehydrogenase | SHLA_8c000760 | Not Available | - | 7041908 - 7042162 | 9051.81 |
| putative sarcosine/opine oxidase subunit b-like dehydrogenase fad-dependent dehydrogenase | SHLA_8c000770 | Not Available | - | 7042159 - 7043334 | 40267.0 |
| transcriptional regulator, lysr family | SHLA_8c000780 | Not Available | + | 7043485 - 7044414 | 34722.9 |
| putative amino-acid abc transporter, periplasmic solute-binding subunit | SHLA_8c000790 | Not Available | + | 7044580 - 7045407 | 29739.7 |
| hypothetical protein | SHLA_8c000800 | Not Available | - | 7045892 - 7046062 | 6455.84 |
| ferrochelatase | SHLA_8c000810 | Not Available | - | 7046763 - 7047815 | 40080.2 |
| cyclopropane fatty acid synthase | SHLA_8c000820 | Not Available | - | 7047832 - 7049115 | 47574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.