Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative conjugal transfer protein trbi | SHLA_14c000860 | Not Available | + | 428095 - 429222 | 39486.2 |
| hypothetical protein | SHLA_14c000870 | Not Available | + | 429225 - 429446 | 8101.01 |
| hypothetical protein | SHLA_14c000880 | Not Available | + | 429582 - 429905 | 12509.6 |
| hypothetical protein | SHLA_14c000890 | Not Available | + | 429902 - 430255 | 13012.4 |
| putative transcriptional regulator | SHLA_14c000900 | Not Available | + | 430252 - 430638 | 14097.2 |
| Trna-ser | Not Available | Not Available | + | 432252 - 432341 | Not Available |
| hypothetical protein | SHLA_14c000920 | Not Available | + | 432357 - 432434 | 2932.53 |
| putative outer membrane protein y4fj | SHLA_14c000930 | Not Available | + | 433123 - 434178 | 37391.0 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | SHLA_14c000940 | Not Available | - | 434318 - 435193 | 31861.0 |
| soluble lytic transglycosylase | SHLA_14c000950 | Not Available | - | 435569 - 437638 | 74946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.