Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease | SHLA_8c000630 | Not Available | + | 7029084 - 7030469 | 47108.5 |
| is21 family transposase | SHLA_8c000640 | Not Available | + | 7030459 - 7031253 | 28896.0 |
| transposase | SHLA_8c000650 | Not Available | - | 7031452 - 7031808 | 13381.5 |
| hypothetical protein | SHLA_8c000660 | Not Available | - | 7032027 - 7032569 | 18798.3 |
| transcriptional regulator tetr family | SHLA_8c000670 | Not Available | + | 7032691 - 7033251 | 19934.9 |
| transposase is5 family | SHLA_8c000680 | Not Available | + | 7033649 - 7034527 | 31339.6 |
| saccharopine dehydrogenase | SHLA_8c000690 | Not Available | - | 7034734 - 7035810 | 39149.2 |
| arginine transport atp-binding protein artm | SHLA_8c000700 | Not Available | - | 7035819 - 7036592 | 27921.1 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | SHLA_8c000710 | Not Available | - | 7036611 - 7037276 | 24984.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase dapa | SHLA_8c000720 | Not Available | - | 7037466 - 7038383 | 31788.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.