Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional activator | SHLA_8c000530 | Not Available | - | 7016043 - 7016948 | 33523.5 |
| hypothetical protein | SHLA_8c000540 | Not Available | + | 7017115 - 7017240 | 5002.15 |
| putative ornithine cyclodeaminase | SHLA_8c000550 | Not Available | - | 7017544 - 7018350 | 28625.0 |
| anaerobic dehydrogenase, typically selenocysteine-containing | SHLA_8c000560 | Not Available | - | 7018547 - 7021813 | 119819.0 |
| abc-type branched-chain amino acid transport system atpase component | SHLA_8c000570 | Not Available | + | 7022349 - 7023092 | 27062.9 |
| abc-type branched-chain amino acid transport system atpase component | SHLA_8c000580 | Not Available | + | 7023092 - 7023793 | 25324.9 |
| branched-chain amino acid abc-type transport system permease component | SHLA_8c000590 | Not Available | + | 7023818 - 7025728 | 66989.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SHLA_8c000600 | Not Available | + | 7025777 - 7027015 | 43995.2 |
| transcriptional regulator | SHLA_8c000610 | Not Available | + | 7027177 - 7027848 | 24742.9 |
| transcriptional regulator | SHLA_8c000620 | Not Available | - | 7028112 - 7029053 | 33516.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.