Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme-binding protein a | SHLA_8c000430 | Not Available | - | 7005307 - 7006833 | 55363.0 |
| glycine cleavage system transcriptional activator | SHLA_8c000440 | Not Available | + | 7006943 - 7007821 | 32008.8 |
| histidine ammonia-lyase | SHLA_8c000450 | Not Available | - | 7008053 - 7009540 | 53412.6 |
| putative homoserine dehydrogenase | SHLA_8c000460 | Not Available | + | 7010001 - 7011359 | 48837.4 |
| hypothetical protein | SHLA_8c000470 | Not Available | + | 7011373 - 7011678 | 11492.7 |
| 2-hydroxy-3-oxopropionate reductase glxr | SHLA_8c000480 | Not Available | + | 7011695 - 7012594 | 30092.5 |
| tripartite atp-independent periplasmic transporter solute receptor, dctp family | SHLA_8c000490 | Not Available | + | 7012627 - 7013622 | 35916.0 |
| trap-type c4-dicarboxylate transport system small permease component | SHLA_8c000500 | Not Available | + | 7013677 - 7014234 | 20076.2 |
| abc transporter, membrane spanning protein | SHLA_8c000510 | Not Available | + | 7014231 - 7015511 | 44596.9 |
| thermosensitive gluconokinase idnk | SHLA_8c000520 | Not Available | + | 7015513 - 7016046 | 19219.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.