Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | SHLA_8c000330 | Not Available | + | 6992927 - 6995122 | 80315.5 |
| hypothetical protein | SHLA_8c000340 | Not Available | - | 6995319 - 6995441 | 4402.52 |
| hypothetical protein | SHLA_8c000350 | Not Available | + | 6995737 - 6996480 | 27850.8 |
| hypothetical protein | SHLA_8c000360 | Not Available | + | 6996692 - 6996994 | 11485.9 |
| amide hydrolase | SHLA_8c000370 | Not Available | - | 6997695 - 6999035 | 47574.1 |
| hypothetical protein | SHLA_8c000380 | Not Available | - | 6999016 - 7000464 | 51921.7 |
| abc transporter, atp-binding protein | SHLA_8c000390 | Not Available | - | 7000697 - 7002736 | 73569.5 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_8c000400 | Not Available | - | 7002740 - 7003618 | 30884.5 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_8c000410 | Not Available | - | 7003615 - 7004568 | 34578.9 |
| hypothetical protein | SHLA_8c000420 | Not Available | - | 7004565 - 7005236 | 24165.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.