Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_8c000230 | Not Available | + | 6981874 - 6982029 | 5303.26 |
| sugar abc transporter | SHLA_8c000240 | Not Available | + | 6982158 - 6983939 | 65085.7 |
| sugar phosphate isomerase/epimerase | SHLA_8c000250 | Not Available | + | 6984203 - 6985045 | 30986.4 |
| abc-type sugar transport system periplasmic component | SHLA_8c000260 | Not Available | + | 6985069 - 6986376 | 47916.1 |
| abc transporter permease yurn | SHLA_8c000270 | Not Available | + | 6986438 - 6987298 | 31334.6 |
| abc-type sugar transport system permease component | SHLA_8c000280 | Not Available | + | 6987295 - 6988113 | 29390.9 |
| threonine dehydrogenase | SHLA_8c000290 | Not Available | + | 6988140 - 6989162 | 36067.4 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SHLA_8c000300 | Not Available | + | 6989209 - 6990315 | 40191.6 |
| chromate transporter, chromate ion transporter (chr) family | SHLA_8c000310 | Not Available | - | 6990432 - 6991829 | 48817.9 |
| hypothetical protein | SHLA_8c000320 | Not Available | - | 6991835 - 6992647 | 30049.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.