Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase cyss | SHLA_75c000200 | Not Available | + | 6940763 - 6942196 | 53230.4 |
| hypothetical protein | SHLA_75c000210 | Not Available | + | 6942193 - 6942675 | 17501.5 |
| hypothetical protein | SHLA_75c000220 | Not Available | + | 6942672 - 6943169 | 18370.5 |
| hypothetical protein | SHLA_75c000230 | Not Available | + | 6943166 - 6943285 | 4438.64 |
| putative glutathione-dependent formaldehyde-activating protein | SHLA_75c000240 | Not Available | + | 6943296 - 6943778 | 17927.2 |
| proline iminopeptidase pip | SHLA_75c000250 | Not Available | + | 6943775 - 6944734 | 35946.5 |
| putative aipm/hcit synthase family transferase | SHLA_75c000260 | Not Available | + | 6944916 - 6946532 | 57642.4 |
| protein rard | SHLA_75c000270 | Not Available | + | 6946643 - 6947587 | 34025.4 |
| acetyltransferase | SHLA_75c000280 | Not Available | + | 6947591 - 6948109 | 19256.8 |
| log family protein | SHLA_75c000290 | Not Available | - | 6948137 - 6948856 | 26194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.