Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylputrescine oxidoreductase puub | SHLA_19c000750 | Not Available | - | 6904430 - 6905710 | 46269.3 |
| abc-type enterochelin transport system, atpase component | SHLA_19c000760 | Not Available | - | 6905777 - 6906535 | 27404.4 |
| abc-type enterochelin transport system, permease component | SHLA_19c000770 | Not Available | - | 6906532 - 6907473 | 32462.3 |
| transport system permease protein | SHLA_19c000780 | Not Available | - | 6907466 - 6908443 | 33575.4 |
| abc-type enterochelin transport system, periplasmic component | SHLA_19c000790 | Not Available | - | 6908440 - 6909342 | 31039.6 |
| hypothetical protein | SHLA_19c000800 | Not Available | - | 6909376 - 6909675 | 11206.1 |
| enterochelin esterase fes | SHLA_19c000810 | Not Available | - | 6909775 - 6911382 | 56659.7 |
| ferrichrysobactin receptor | SHLA_19c000820 | Not Available | - | 6911382 - 6913583 | 79170.0 |
| dna-binding domain-containing protein, arac-type | SHLA_19c000830 | Not Available | + | 6913755 - 6914648 | 33396.3 |
| rna polymerase sigma factor | SHLA_19c000840 | Not Available | + | 6914878 - 6915390 | 19018.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.