Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase | SHLA_19c000640 | Not Available | + | 6894215 - 6894811 | 20848.1 |
| aaa atpase | SHLA_19c000650 | Not Available | - | 6894815 - 6896131 | 47473.8 |
| abc-type nitrate/sulfonate/bicarbonate transport system atpase component | SHLA_19c000660 | Not Available | - | 6896261 - 6897031 | 28165.2 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | SHLA_19c000670 | Not Available | - | 6897040 - 6898014 | 34499.8 |
| putative aliphatic sulfonates transport permease protein ssuc | SHLA_19c000680 | Not Available | - | 6898050 - 6898901 | 30415.2 |
| putative flavin reductase | SHLA_19c000700 | Not Available | - | 6900387 - 6900926 | 18797.4 |
| endoribonuclease l-psp | SHLA_19c000710 | Not Available | - | 6901126 - 6901518 | 14035.6 |
| d-threonine aldolase | SHLA_19c000720 | Not Available | - | 6901592 - 6902680 | 38304.8 |
| dehydrogenase | SHLA_19c000730 | Not Available | - | 6902789 - 6903538 | 25854.8 |
| short-chain alcohol dehydrogenase of unknown specificity | SHLA_19c000740 | Not Available | - | 6903549 - 6904322 | 26534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.