Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | SHLA_19c000540 | Not Available | - | 6883809 - 6884762 | 34554.6 |
| universal stress protein uspa | SHLA_19c000550 | Not Available | - | 6884860 - 6885732 | 30190.8 |
| putative amino acid transporter | SHLA_19c000560 | Not Available | - | 6885729 - 6887222 | 52026.2 |
| leucine-responsive regulatory protein lrp | SHLA_19c000570 | Not Available | + | 6887502 - 6888044 | 19956.2 |
| carbon-nitrogen hydrolase | SHLA_19c000580 | Not Available | + | 6888065 - 6888976 | 32595.2 |
| phosphatidate cytidylyltransferase | SHLA_19c000590 | Not Available | - | 6889004 - 6889933 | 33854.9 |
| phospholipid/glycerol acyltransferase | SHLA_19c000600 | Not Available | - | 6889933 - 6890586 | 23873.3 |
| hypothetical protein | SHLA_19c000610 | Not Available | - | 6890583 - 6891020 | 15237.0 |
| dual specificity protein phosphatase | SHLA_19c000620 | Not Available | - | 6891017 - 6892351 | 48617.6 |
| putative hydrolase protein | SHLA_19c000630 | Not Available | - | 6892359 - 6894095 | 63973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.