Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter,periplasmic solute-binding protein | SHLA_19c000340 | Not Available | - | 6858794 - 6859846 | 38070.9 |
| dehydrogenase | SHLA_19c000350 | Not Available | - | 6860054 - 6860794 | 26329.6 |
| transcriptional regulator, gntr family | SHLA_19c000360 | Not Available | - | 6860867 - 6861547 | 25026.2 |
| aminoglycoside phosphotransferase | SHLA_19c000370 | Not Available | + | 6861731 - 6862780 | 37776.2 |
| aminotransferase | SHLA_19c000380 | Not Available | + | 6862783 - 6864099 | 47315.9 |
| crispr-associated endoribonuclease cas2 | SHLA_19c000390 | Not Available | - | 6866132 - 6866422 | 10805.1 |
| crispr-associated endonuclease cas1 | SHLA_19c000400 | Not Available | - | 6866430 - 6867464 | 38703.9 |
| crispr-associated protein cas4 | SHLA_19c000410 | Not Available | - | 6867461 - 6868102 | 23550.7 |
| hypothetical protein | SHLA_19c000420 | Not Available | - | 6868288 - 6868461 | 6551.76 |
| crispr-associated protein, csd2 family | SHLA_19c000430 | Not Available | - | 6868703 - 6869653 | 35214.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.