Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase/dna polymerase involved in dna repair | SHLA_19c000240 | Not Available | - | 6848741 - 6850168 | 51357.3 |
| hypothetical protein | SHLA_19c000250 | Not Available | - | 6850176 - 6850937 | 26589.9 |
| hypothetical protein | SHLA_19c000260 | Not Available | + | 6851112 - 6851417 | 10622.6 |
| hypothetical protein | SHLA_19c000270 | Not Available | - | 6851518 - 6851844 | 11534.6 |
| hth-type transcriptional regulator cdhr | SHLA_19c000280 | Not Available | - | 6851933 - 6852952 | 37187.6 |
| dmt(drug/metabolite transporter) superfamily permease | SHLA_19c000290 | Not Available | - | 6853083 - 6853934 | 29279.8 |
| transcriptional regulator, gntr family | SHLA_19c000300 | Not Available | + | 6854143 - 6855543 | 50438.7 |
| abc-type spermidine/putrescine transport system permease component ii | SHLA_19c000310 | Not Available | - | 6855540 - 6856322 | 27531.7 |
| putrescine transport system permease protein poth | SHLA_19c000320 | Not Available | - | 6856326 - 6857504 | 42345.6 |
| spermidine/putrescine import atp-binding protein pota | SHLA_19c000330 | Not Available | - | 6857501 - 6858568 | 38897.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.