Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-tagatose-1,6-bisphosphate aldolase subunit kbaz | SHLA_19c000140 | Not Available | - | 6832771 - 6834063 | 46519.0 |
| putative tagatose-6-phosphate ketose/aldose isomerase agas | SHLA_19c000150 | Not Available | - | 6834060 - 6836123 | 71625.8 |
| putative aga operon transcriptional repressor | SHLA_19c000160 | Not Available | - | 6836120 - 6836995 | 31519.9 |
| lactose transport atp-binding protein lack | SHLA_19c000170 | Not Available | - | 6836992 - 6838128 | 40542.5 |
| hypothetical protein | SHLA_19c000180 | Not Available | - | 6838128 - 6840164 | 74424.0 |
| sugar abc transporter | SHLA_19c000190 | Not Available | - | 6840161 - 6841006 | 30612.1 |
| abc-type sugar transport system permease component | SHLA_19c000200 | Not Available | - | 6841008 - 6841877 | 32208.6 |
| abc-type sugar transport system periplasmic component | SHLA_19c000210 | Not Available | - | 6841981 - 6843252 | 45048.5 |
| putative hydrolase, coce/nond family | SHLA_19c000220 | Not Available | + | 6843494 - 6845494 | 73808.7 |
| dna-directed dna polymerase iii | SHLA_19c000230 | Not Available | - | 6845550 - 6848744 | 120075.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.