Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine dehydratase/bile acid-inducible protein f | SHLA_19c000040 | Not Available | - | 6822725 - 6823879 | 41709.1 |
| galactose mutarotase | SHLA_19c000050 | Not Available | - | 6824079 - 6824972 | 32669.2 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | SHLA_19c000060 | Not Available | - | 6824972 - 6825727 | 26548.7 |
| ribose import atp-binding protein rbsa | SHLA_19c000070 | Not Available | - | 6825735 - 6826466 | 26630.4 |
| ribose transport system permease protein rbsc | SHLA_19c000080 | Not Available | - | 6826463 - 6827446 | 34542.9 |
| abc transporter, periplasmic solute-binding protein | SHLA_19c000090 | Not Available | - | 6827515 - 6828492 | 34556.3 |
| transcriptional regulator, gntr family | SHLA_19c000100 | Not Available | - | 6828536 - 6829228 | 25887.2 |
| d-galactonate dehydratase dgod | SHLA_19c000110 | Not Available | - | 6829301 - 6830500 | 44195.8 |
| gntr domain-containing protein | SHLA_19c000120 | Not Available | - | 6830503 - 6831234 | 26431.5 |
| n-acetylglucosamine-6-phosphate deacetylase naga | SHLA_19c000130 | Not Available | - | 6831629 - 6832774 | 39882.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.