Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol resistance protein cmla | SHLA_14c000660 | Not Available | + | 409032 - 410246 | 42754.2 |
| transcriptional regulator | SHLA_14c000670 | Not Available | + | 410275 - 410499 | 8000.86 |
| transcriptional regulator | SHLA_14c000680 | Not Available | + | 410520 - 410810 | 10132.9 |
| transcriptional regulator tetr family | SHLA_14c000690 | Not Available | - | 410815 - 411441 | 23317.4 |
| arabinose efflux permease | SHLA_14c000700 | Not Available | + | 411546 - 412721 | 40825.7 |
| transcriptional regulator | SHLA_14c000710 | Not Available | + | 412811 - 413728 | 32845.8 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | SHLA_14c000720 | Not Available | - | 413763 - 414797 | 35624.4 |
| transcriptional regulator lysr family | SHLA_14c000730 | Not Available | + | 415717 - 416691 | 34992.3 |
| conjugal transfer protein trag | SHLA_14c000740 | Not Available | + | 416822 - 418810 | 73149.7 |
| dna-binding copg-like protein | SHLA_14c000750 | Not Available | + | 418821 - 419300 | 17568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.