Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylase involved in ubiquinone/menaquinone biosynthesis | SHLA_42c000620 | Not Available | - | 6796434 - 6797213 | 28879.6 |
| methyl-accepting chemotaxis protein | SHLA_42c000630 | Not Available | - | 6797213 - 6798343 | 42451.0 |
| fe(3+) dicitrate transport atp-binding protein fece | SHLA_42c000640 | Not Available | - | 6798582 - 6799388 | 29406.7 |
| abc transporter,permease btuc | SHLA_42c000650 | Not Available | - | 6799385 - 6800410 | 34835.8 |
| abc transporter,periplasmic solute-binding protein btuf | SHLA_42c000660 | Not Available | - | 6800410 - 6801423 | 36842.1 |
| hypothetical protein | SHLA_42c000670 | Not Available | - | 6801808 - 6802923 | 40369.1 |
| transposase | SHLA_42c000680 | Not Available | - | 6802981 - 6803301 | 12419.2 |
| transposase | SHLA_42c000690 | Not Available | - | 6803346 - 6803735 | 14434.4 |
| aliphatic amidase amie | SHLA_42c000700 | Not Available | + | 6804815 - 6805852 | 38362.5 |
| protein cbbq | SHLA_42c000710 | Not Available | + | 6805916 - 6806755 | 30967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.