Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_42c000520 | Not Available | + | 6784848 - 6785174 | 12146.5 |
| hypothetical protein | SHLA_42c000530 | Not Available | + | 6785276 - 6786970 | 63047.9 |
| aaa domain containing protein | SHLA_42c000540 | Not Available | + | 6787044 - 6787859 | 30072.1 |
| von willebrand factor type a domain-containing protein | SHLA_42c000550 | Not Available | + | 6787856 - 6789865 | 75212.7 |
| hypothetical protein | SHLA_42c000560 | Not Available | + | 6789910 - 6791046 | 41375.0 |
| abc-type branched-chain amino acid transport system periplasmic component | SHLA_42c000570 | Not Available | + | 6791415 - 6792662 | 45474.1 |
| abc transporter permease | SHLA_42c000580 | Not Available | + | 6792721 - 6793590 | 30943.7 |
| abc-type branched-chain amino acid transport system permease component | SHLA_42c000590 | Not Available | + | 6793625 - 6794734 | 39512.8 |
| high-affinity branched-chain amino acid transport atp-binding protein livg | SHLA_42c000600 | Not Available | + | 6794731 - 6795486 | 27522.3 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | SHLA_42c000610 | Not Available | + | 6795479 - 6796174 | 25382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.