Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidase | SHLA_42c000420 | Not Available | + | 6775652 - 6776203 | 19685.4 |
| abc-type branched-chain amino acid transport system periplasmic component | SHLA_42c000430 | Not Available | + | 6776642 - 6777727 | 39984.5 |
| hypothetical protein | SHLA_42c000440 | Not Available | + | 6777739 - 6778398 | 24813.1 |
| hypothetical protein | SHLA_42c000450 | Not Available | + | 6778946 - 6779575 | 22795.4 |
| hypothetical protein | SHLA_42c000460 | Not Available | + | 6779591 - 6780583 | 36467.3 |
| cobw/p47k family protein | SHLA_42c000470 | Not Available | + | 6780644 - 6781627 | 36322.4 |
| ferredoxin, 2fe-2s | SHLA_42c000480 | Not Available | + | 6781637 - 6782014 | 14213.0 |
| putative cobalt transporter subunit | SHLA_42c000490 | Not Available | + | 6782285 - 6782503 | 7809.5 |
| putative cobalt transporter subunit | SHLA_42c000500 | Not Available | + | 6782525 - 6783250 | 25341.4 |
| hypothetical protein | SHLA_42c000510 | Not Available | + | 6783312 - 6784835 | 54718.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.