Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide transport system, periplasmic component | SHLA_42c000320 | Not Available | + | 6764189 - 6765757 | 57037.9 |
| putative peptide abc transporter permease protein y4tp | SHLA_42c000330 | Not Available | + | 6765764 - 6766723 | 34052.9 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_42c000340 | Not Available | + | 6766720 - 6767541 | 29101.5 |
| glutathione import atp-binding protein gsia | SHLA_42c000350 | Not Available | + | 6767546 - 6769204 | 59541.0 |
| xaa-pro aminopeptidase | SHLA_42c000360 | Not Available | + | 6769206 - 6770393 | 43601.0 |
| bile acid:sodium symporter | SHLA_42c000370 | Not Available | - | 6770527 - 6771501 | 34207.6 |
| nmra family protein | SHLA_42c000380 | Not Available | - | 6771704 - 6772567 | 30677.3 |
| transcriptional regulator hxlr family | SHLA_42c000390 | Not Available | + | 6772652 - 6772987 | 12780.6 |
| hypothetical protein | SHLA_42c000400 | Not Available | + | 6773090 - 6774562 | 54437.6 |
| arac family transcriptional regulator | SHLA_42c000410 | Not Available | - | 6774583 - 6775488 | 33955.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.