Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_42c000220 | Not Available | + | 6755694 - 6755927 | 8417.26 |
| type iv secretory pathway, virb6 component | SHLA_42c000230 | Not Available | + | 6755933 - 6756868 | 33119.5 |
| hypothetical protein | SHLA_42c000240 | Not Available | + | 6756903 - 6757169 | 9782.73 |
| type iv secretory pathway, component virb8 | SHLA_42c000250 | Not Available | + | 6757174 - 6757845 | 24726.2 |
| p-type conjugative transfer protein virb9 | SHLA_42c000260 | Not Available | + | 6757842 - 6758696 | 31164.8 |
| type iv secretory pathway, virb10 component | SHLA_42c000270 | Not Available | + | 6758709 - 6759881 | 42390.1 |
| p-type dna transfer atpase virb11 | SHLA_42c000280 | Not Available | + | 6759889 - 6760881 | 36344.6 |
| dihydroorotase | SHLA_42c000290 | Not Available | - | 6761458 - 6761712 | 9106.92 |
| transcriptional regulator | SHLA_42c000300 | Not Available | - | 6762179 - 6762697 | 18954.2 |
| xaa-pro aminopeptidase | SHLA_42c000310 | Not Available | - | 6762793 - 6763950 | 41686.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.