Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integrase/recombinase xerd | SHLA_42c000020 | Not Available | + | 6737286 - 6738431 | 41319.3 |
| transcriptional regulator | SHLA_42c000030 | Not Available | + | 6738916 - 6739401 | 17680.2 |
| hypothetical protein | SHLA_42c000040 | Not Available | + | 6739764 - 6740342 | 21321.4 |
| homocysteine s-methyltransferase | SHLA_42c000050 | Not Available | - | 6740435 - 6741358 | 33476.6 |
| hypothetical protein | SHLA_42c000060 | Not Available | + | 6741616 - 6742062 | 16446.6 |
| hypothetical protein | SHLA_42c000070 | Not Available | + | 6742314 - 6742430 | 4125.03 |
| hypothetical protein | SHLA_42c000080 | Not Available | + | 6742891 - 6743097 | 7198.42 |
| hypothetical protein | SHLA_42c000090 | Not Available | + | 6743147 - 6743428 | 9810.82 |
| soluble lytic murein transglycosylase-like protein | SHLA_42c000100 | Not Available | - | 6744671 - 6745534 | 31479.3 |
| hypothetical protein | SHLA_42c000110 | Not Available | - | 6746016 - 6746183 | 6134.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.