Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system periplasmic component | SHLA_13c000970 | Not Available | - | 6715153 - 6716094 | 32289.4 |
| transcriptional regulator xre family | SHLA_13c000980 | Not Available | - | 6716233 - 6716853 | 22687.3 |
| putative succinylglutamate desuccinylase | SHLA_13c000990 | Not Available | - | 6716943 - 6717935 | 34351.4 |
| ectoine utilization protein eutd | SHLA_13c001000 | Not Available | - | 6717939 - 6719120 | 44142.8 |
| ornithine cyclodeaminase 1 | SHLA_13c001010 | Not Available | - | 6719170 - 6720162 | 34588.7 |
| putative threonine dehydratase | SHLA_13c001020 | Not Available | - | 6720159 - 6721166 | 34733.2 |
| ectoine utilization protein euta | SHLA_13c001030 | Not Available | - | 6721163 - 6721945 | 27482.3 |
| putative amino-acid abc transporter permease protein | SHLA_13c001040 | Not Available | - | 6721945 - 6722607 | 24552.7 |
| putative amino-acid abc transporter permease protein | SHLA_13c001050 | Not Available | - | 6722610 - 6723269 | 23723.8 |
| penicillin g acylase pac | SHLA_107c000010 | Not Available | - | 6723517 - 6725892 | 86992.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.