Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_14c000560 | Not Available | - | 399940 - 400227 | 11017.9 |
| phage transcriptional regulator, alpa | SHLA_14c000570 | Not Available | + | 400690 - 400959 | 10026.1 |
| putative replication protein | SHLA_14c000580 | Not Available | + | 400960 - 402123 | 43704.8 |
| transposase for insertion sequence element is1111a | SHLA_14c000590 | Not Available | - | 402372 - 403430 | 38875.1 |
| hypothetical protein duf2840 | SHLA_14c000600 | Not Available | + | 403678 - 404196 | 19661.6 |
| conjugative transfer signal peptidase traf | SHLA_14c000610 | Not Available | + | 404193 - 404738 | 19723.1 |
| hypothetical protein | SHLA_14c000620 | Not Available | + | 404774 - 405109 | 12584.6 |
| putative transglycosylase | SHLA_14c000630 | Not Available | + | 405106 - 405942 | 29286.8 |
| hypothetical protein | SHLA_14c000640 | Not Available | + | 405939 - 406517 | 21400.7 |
| type iv secretory pathway, vird2 component (relaxase) | SHLA_14c000650 | Not Available | + | 406759 - 408813 | 76294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.