Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidase | SHLA_13c000870 | Not Available | + | 6706418 - 6707086 | 25243.2 |
| 4-aminobutyrate aminotransferase | SHLA_13c000880 | Not Available | + | 6707100 - 6707561 | 16074.8 |
| acetylornithine aminotransferase argd | SHLA_13c000890 | Not Available | + | 6707510 - 6708370 | 29925.9 |
| hydantoin utilization protein c | SHLA_13c000900 | Not Available | - | 6708374 - 6709618 | 43801.3 |
| membrane complex biogenesis protein, btpa family | SHLA_13c000910 | Not Available | - | 6709615 - 6710448 | 29745.5 |
| ribokinase | SHLA_13c000920 | Not Available | - | 6710454 - 6711365 | 30543.8 |
| hypothetical protein | SHLA_13c000930 | Not Available | - | 6711390 - 6712154 | 27987.3 |
| phosphotriesterase protein php | SHLA_13c000940 | Not Available | - | 6712183 - 6713274 | 40043.0 |
| ribose transport system permease protein rbsc | SHLA_13c000950 | Not Available | - | 6713276 - 6714286 | 34681.2 |
| ribose import atp-binding protein rbsa | SHLA_13c000960 | Not Available | - | 6714283 - 6715083 | 28823.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.