Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter periplasmic sugar-binding protein | SHLA_13c000670 | Not Available | - | 6684989 - 6686017 | 37256.3 |
| choline/ethanolamine kinase | SHLA_13c000680 | Not Available | - | 6686222 - 6687127 | 32782.1 |
| methyltransferase type 11 | SHLA_13c000690 | Not Available | + | 6687210 - 6687851 | 22192.6 |
| cation diffusion facilitator family transporter | SHLA_13c000700 | Not Available | - | 6687863 - 6688852 | 35545.4 |
| hypothetical protein | SHLA_13c000710 | Not Available | - | 6688939 - 6689211 | 9982.25 |
| aminomethyltransferase gcvt | SHLA_13c000720 | Not Available | - | 6689300 - 6691741 | 89133.3 |
| choline/ethanolamine kinase | SHLA_13c000730 | Not Available | - | 6691738 - 6692649 | 33443.6 |
| glycine betaine transport system permease protein opuab | SHLA_13c000740 | Not Available | - | 6692649 - 6694682 | 72752.4 |
| glycine betaine/l-proline transport atp binding subunit | SHLA_13c000750 | Not Available | - | 6694687 - 6695706 | 36708.8 |
| glycine betaine abc transporter substrate-binding protein | SHLA_13c000760 | Not Available | - | 6695801 - 6696766 | 35434.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.