Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative ribonuclease vapc | SHLA_13c000570 | Not Available | - | 6673896 - 6674309 | 15046.2 |
| hypothetical protein | SHLA_13c000580 | Not Available | - | 6674306 - 6674554 | 9304.96 |
| alcohol dehydrogenase | SHLA_13c000590 | Not Available | - | 6674626 - 6676251 | 59435.3 |
| putative l-xylulose kinase lyx | SHLA_13c000600 | Not Available | - | 6676248 - 6677777 | 54313.4 |
| putative aldolase | SHLA_13c000610 | Not Available | - | 6677808 - 6678650 | 30924.7 |
| glycerol-3-phosphate dehydrogenase glpd | SHLA_13c000620 | Not Available | - | 6678623 - 6680371 | 63953.8 |
| putative aldoketo reductase protein | SHLA_13c000630 | Not Available | - | 6680384 - 6681379 | 35423.9 |
| transcriptional regulator lsrr | SHLA_13c000640 | Not Available | - | 6681376 - 6682383 | 35760.1 |
| ribose transport system permease protein rbsc | SHLA_13c000650 | Not Available | - | 6682385 - 6683374 | 34358.4 |
| ribose import atp-binding protein rbsa 2 | SHLA_13c000660 | Not Available | - | 6683397 - 6684923 | 54464.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.