Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase domain-containing protein | SHLA_13c000470 | Not Available | + | 6661835 - 6662920 | 40351.3 |
| transcriptional regulator tetr family | SHLA_13c000480 | Not Available | + | 6662953 - 6663519 | 20438.5 |
| hypothetical protein | SHLA_13c000490 | Not Available | + | 6663548 - 6664393 | 31496.1 |
| acetyl-/propionyl-coenzyme a carboxylase alpha chain | SHLA_13c000500 | Not Available | - | 6664434 - 6666164 | 60938.9 |
| biotin-dependent carboxylase | SHLA_13c000510 | Not Available | - | 6666175 - 6667767 | 55559.8 |
| hypothetical protein upf0317 | SHLA_13c000520 | Not Available | - | 6667775 - 6668584 | 28792.5 |
| hypothetical protein upf0271 | SHLA_13c000530 | Not Available | - | 6668594 - 6669361 | 26646.8 |
| mn2+ and fe2+ transporter of the nramp family | SHLA_13c000540 | Not Available | - | 6669436 - 6670701 | 43905.7 |
| gntr family transcriptional regulator | SHLA_13c000550 | Not Available | + | 6670946 - 6671608 | 24862.0 |
| diguanylate cyclase | SHLA_13c000560 | Not Available | - | 6671621 - 6673669 | 76485.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.