Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_13c000370 | Not Available | + | 6651666 - 6652013 | 12098.1 |
| di- and tricarboxylate transporter | SHLA_13c000380 | Not Available | + | 6652048 - 6653526 | 50931.3 |
| glycerate kinase glxk | SHLA_13c000390 | Not Available | + | 6653672 - 6654847 | 40216.7 |
| sugar abc transporter periplasmic protein | SHLA_13c000400 | Not Available | + | 6654991 - 6656259 | 45493.5 |
| sugar phosphate isomerase/epimerase | SHLA_13c000410 | Not Available | + | 6656386 - 6657261 | 32154.0 |
| 6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase | SHLA_13c000420 | Not Available | + | 6657258 - 6658043 | 27557.1 |
| transcriptional regulator/sugar kinase | SHLA_13c000430 | Not Available | + | 6658040 - 6658984 | 32806.4 |
| lactose transport atp-binding protein lack | SHLA_13c000440 | Not Available | + | 6658981 - 6660054 | 39263.7 |
| trehalose transport system permease protein suga | SHLA_13c000450 | Not Available | + | 6660056 - 6660964 | 33596.8 |
| trehalose/maltose transport system permease protein malg | SHLA_13c000460 | Not Available | + | 6660966 - 6661805 | 30779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.