Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SHLA_13c000270 | Not Available | + | 6643404 - 6643658 | 9221.86 |
| long-chain-fatty-acid--coa ligase lcfb | SHLA_13c000280 | Not Available | + | 6643672 - 6645198 | 54599.0 |
| nh(3)-dependent nad(+) synthetase nade | SHLA_13c000290 | Not Available | + | 6645195 - 6646184 | 36108.4 |
| minor extracellular protease epr | SHLA_13c000300 | Not Available | - | 6646181 - 6647569 | 48162.9 |
| rna polymerase sigma factor, sigma-70 family | SHLA_13c000310 | Not Available | + | 6647680 - 6648222 | 19821.9 |
| putative transmembrane anti-sigma factor | SHLA_13c000320 | Not Available | + | 6648219 - 6648959 | 26341.9 |
| tetr family transcriptional regulator | SHLA_13c000330 | Not Available | + | 6649213 - 6649893 | 24771.2 |
| hypothetical protein | SHLA_13c000340 | Not Available | + | 6649844 - 6650380 | 19222.5 |
| hypothetical protein | SHLA_13c000350 | Not Available | + | 6650373 - 6650681 | 11298.9 |
| hypothetical protein | SHLA_13c000360 | Not Available | + | 6650771 - 6651487 | 26534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.