Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine import atp-binding protein pota | SHLA_22c000900 | Not Available | + | 6595858 - 6596952 | 39294.5 |
| putative xylanase/chitin deacetyase | SHLA_22c000910 | Not Available | + | 6596983 - 6597864 | 33889.6 |
| transposase | SHLA_145c000010 | Not Available | + | 6598074 - 6599594 | 57581.4 |
| dna replication protein | SHLA_145c000020 | Not Available | + | 6599584 - 6600378 | 28957.1 |
| transposase | SHLA_168c000010 | Not Available | + | 6601168 - 6601596 | 15611.6 |
| galactonate operon transcriptional repressor | SHLA_13c000020 | Not Available | - | 6604304 - 6605086 | 28899.6 |
| abc-type sugar transport system periplasmic component | SHLA_13c000030 | Not Available | + | 6605263 - 6606246 | 34338.1 |
| arabinose import atp-binding protein arag | SHLA_13c000040 | Not Available | + | 6606327 - 6607841 | 55152.0 |
| l-arabinose transport system permease protein arah | SHLA_13c000050 | Not Available | + | 6607838 - 6608788 | 32742.3 |
| heparinase ii/iii family protein | SHLA_13c000060 | Not Available | + | 6609232 - 6610848 | 57615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.