Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase gmd | SHLA_22c000600 | Not Available | - | 6563719 - 6564789 | 40421.8 |
| glycosyltransferase | SHLA_22c000610 | Not Available | + | 6565047 - 6566309 | 46106.1 |
| glycosyltransferase bme | SHLA_22c000620 | Not Available | + | 6566306 - 6567547 | 45375.8 |
| glycosyltransferase | SHLA_22c000630 | Not Available | + | 6567544 - 6568725 | 43215.9 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SHLA_22c000640 | Not Available | - | 6568726 - 6569319 | 21657.5 |
| lipopolysaccharide core biosynthesis glycosyltransferase waae | SHLA_22c000650 | Not Available | - | 6569457 - 6570290 | 32693.2 |
| udp-phosphate alpha-n-acetylglucosaminyltransferase | SHLA_22c000660 | Not Available | - | 6570308 - 6571417 | 39286.3 |
| putative 3-demethylubiquinone-9 3-methyltransferase | SHLA_22c000670 | Not Available | + | 6571730 - 6572443 | 27048.7 |
| hypothetical protein | SHLA_22c000680 | Not Available | - | 6573181 - 6574476 | 47964.0 |
| hypothetical protein | SHLA_22c000690 | Not Available | + | 6574853 - 6576181 | 48438.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.