Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, luxr family | SHLA_22c000500 | Not Available | - | 6553283 - 6554080 | 28894.9 |
| hypothetical protein | SHLA_22c000510 | Not Available | - | 6554185 - 6554838 | 24454.5 |
| glucose-1-phosphate cytidylyltransferase rfbf | SHLA_22c000520 | Not Available | - | 6554835 - 6555647 | 31179.7 |
| methyltransferase | SHLA_22c000530 | Not Available | - | 6555644 - 6556939 | 48008.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc | SHLA_22c000540 | Not Available | + | 6557226 - 6557756 | 20003.6 |
| hypothetical protein | SHLA_22c000550 | Not Available | - | 6557748 - 6559079 | 48578.9 |
| putative epimerase/dehydratase | SHLA_22c000560 | Not Available | - | 6559089 - 6560159 | 38885.6 |
| glutamate-1-semialdehyde 2,1-aminomutase heml | SHLA_22c000570 | Not Available | - | 6560286 - 6561629 | 48776.0 |
| response regulator | SHLA_22c000580 | Not Available | - | 6561726 - 6562475 | 27324.5 |
| gdp-l-fucose synthase fcl | SHLA_22c000590 | Not Available | - | 6562755 - 6563735 | 36193.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.