Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_22c000400 | Not Available | + | 6541491 - 6542057 | 20599.4 |
| hypothetical protein | SHLA_22c000410 | Not Available | + | 6542045 - 6542215 | 6279.4 |
| hypothetical protein duf4038 | SHLA_22c000420 | Not Available | - | 6542231 - 6543571 | 48000.7 |
| glycosyltransferase | SHLA_22c000430 | Not Available | - | 6543599 - 6544795 | 43580.1 |
| exopolysaccharide synthesis protein amsj | SHLA_22c000440 | Not Available | + | 6544996 - 6546210 | 44515.7 |
| exopolysaccharide export protein pssl | SHLA_22c000450 | Not Available | + | 6546376 - 6547827 | 51267.0 |
| glycosyltransferase | SHLA_22c000460 | Not Available | + | 6547831 - 6548802 | 35907.4 |
| methyltransferase | SHLA_22c000470 | Not Available | + | 6548969 - 6549640 | 25248.2 |
| exopolysaccharide production protein exof | SHLA_22c000480 | Not Available | - | 6549802 - 6551058 | 45395.6 |
| succinoglycan biosynthesis transport protein exop | SHLA_22c000490 | Not Available | - | 6551071 - 6553257 | 76824.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.