Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_246c000010 | Not Available | - | 6493548 - 6494057 | 19339.6 |
| succinate-semialdehyde dehydrogenase gabd | SHLA_22c000010 | Not Available | + | 6494925 - 6496418 | 53027.6 |
| general l-amino acid-binding periplasmic protein aapj | SHLA_22c000020 | Not Available | + | 6496551 - 6497540 | 34923.2 |
| amino acid abc transporter membrane protein 1, paat family | SHLA_22c000030 | Not Available | + | 6497540 - 6498664 | 39906.7 |
| amino acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | SHLA_22c000040 | Not Available | + | 6498661 - 6499740 | 38905.4 |
| hth-type transcriptional regulator mcbr | SHLA_22c000050 | Not Available | + | 6499743 - 6500444 | 25357.5 |
| aminoglycoside phosphotransferase | SHLA_22c000060 | Not Available | + | 6500441 - 6501430 | 36534.0 |
| 4-aminobutyrate aminotransferase gabt | SHLA_22c000070 | Not Available | + | 6501448 - 6502770 | 47185.6 |
| abc-type polar amino acid transport system atpase component | SHLA_22c000080 | Not Available | + | 6502838 - 6503641 | 30551.3 |
| l-sulfolactate dehydrogenase comc | SHLA_22c000090 | Not Available | + | 6503678 - 6504727 | 37187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.