Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transmembrane protein | SHLA_57c000070 | Not Available | - | 6452222 - 6453391 | 43194.5 |
| cellobiose phosphorylase | SHLA_57c000080 | Not Available | - | 6453417 - 6462020 | 320419.0 |
| hypothetical protein | SHLA_57c000090 | Not Available | + | 6462676 - 6462885 | 7664.29 |
| methionine synthase meth | SHLA_57c000100 | Not Available | + | 6462969 - 6466760 | 138023.0 |
| hypothetical protein upf0324 | SHLA_57c000110 | Not Available | - | 6466767 - 6467801 | 35112.7 |
| transcriptional regulator, lysr family | SHLA_57c000120 | Not Available | + | 6467877 - 6468740 | 31207.6 |
| precorrin-4 c(11)-methyltransferase cobm | SHLA_57c000130 | Not Available | - | 6468797 - 6469561 | 26930.3 |
| precorrin-6y c(5,15)-methyltransferase | SHLA_57c000140 | Not Available | - | 6469558 - 6470820 | 43721.7 |
| precorrin-6a reductase cobk | SHLA_57c000150 | Not Available | + | 6470837 - 6471583 | 26126.2 |
| precorrin-3b c(17)-methyltransferase cobj | SHLA_57c000160 | Not Available | - | 6471547 - 6472311 | 27452.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.