Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-2-deoxygluconokinase iolc | SHLA_14c000060 | Not Available | - | 360403 - 362337 | 70740.4 |
| transcriptional regulator, rpir family | SHLA_14c000070 | Not Available | - | 362459 - 363316 | 30542.4 |
| putative dehydrogenase | SHLA_14c000080 | Not Available | + | 363529 - 364650 | 40873.0 |
| hypothetical protein | SHLA_14c000090 | Not Available | + | 364748 - 368095 | 121890.0 |
| putative transcriptional regulator | SHLA_14c000100 | Not Available | + | 368232 - 369167 | 34607.1 |
| calcium binding protein | SHLA_14c000110 | Not Available | - | 369244 - 370356 | 39096.5 |
| integrase family protein | SHLA_14c000120 | Not Available | + | 370826 - 372031 | 45157.9 |
| hypothetical protein | SHLA_14c000130 | Not Available | + | 372024 - 372773 | 28335.7 |
| transcriptional regulator alpa family | SHLA_14c000140 | Not Available | + | 372927 - 373103 | 6312.93 |
| hypothetical protein | SHLA_14c000150 | Not Available | + | 373115 - 373333 | 7760.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.