Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase sdr | SHLA_61c000410 | Not Available | - | 349418 - 350245 | 28832.4 |
| transcriptional regulator, lysr family | SHLA_61c000420 | Not Available | + | 350333 - 351232 | 32919.0 |
| hypothetical protein | SHLA_61c000430 | Not Available | + | 351452 - 351721 | 9843.21 |
| hypothetical protein | SHLA_61c000440 | Not Available | - | 351701 - 351856 | 5811.13 |
| rtx toxin | SHLA_61c000450 | Not Available | + | 352061 - 353935 | 66013.9 |
| acyl-coa dehydrogenase acda | SHLA_14c000010 | Not Available | - | 354119 - 355342 | 44892.8 |
| poly(3-hydroxyalkanoate) depolymerase c | SHLA_14c000020 | Not Available | + | 355572 - 356600 | 37970.5 |
| 5-deoxy-glucuronate isomerase iolb | SHLA_14c000030 | Not Available | - | 356608 - 357402 | 28976.0 |
| rhizopine catabolism protein mocc | SHLA_14c000040 | Not Available | - | 357438 - 358355 | 33446.9 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase iold | SHLA_14c000050 | Not Available | - | 358472 - 360322 | 65440.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.