Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione import atp-binding protein gsia | SHLA_61c000310 | Not Available | + | 340042 - 341862 | 66662.0 |
| hypothetical protein | SHLA_61c000320 | Not Available | - | 342202 - 342447 | 8409.09 |
| nicotinate dehydrogenase subunit b | SHLA_61c000330 | Not Available | - | 342540 - 344351 | 64670.7 |
| isoquinoline 1-oxidoreductase subunit alpha | SHLA_61c000340 | Not Available | - | 344351 - 344818 | 16298.6 |
| putative methyltransferase, possible pmta-like phospholipid n-methyltransferase | SHLA_61c000350 | Not Available | - | 344835 - 345413 | 20929.7 |
| putative cnmp-binding protein, possible crp-like transcriptional regulator | SHLA_61c000360 | Not Available | - | 345480 - 346085 | 22852.8 |
| hypothetical protein | SHLA_61c000370 | Not Available | - | 346367 - 346810 | 15798.8 |
| cupin 2 domain-containing protein | SHLA_61c000380 | Not Available | - | 346866 - 347225 | 13030.4 |
| hth-type transcriptional regulator pecs | SHLA_61c000390 | Not Available | + | 347399 - 347959 | 20823.9 |
| calcium binding hemolysin protein prtg | SHLA_61c000400 | Not Available | + | 348121 - 349119 | 34896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.