Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asp/glu/hydantoin racemase | SHLA_61c000210 | Not Available | + | 330213 - 330935 | 25675.2 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_61c000220 | Not Available | + | 330962 - 331846 | 31233.0 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_61c000230 | Not Available | + | 331851 - 332798 | 33773.6 |
| betaine aldehyde dehydrogenase betb | SHLA_61c000240 | Not Available | + | 332810 - 334330 | 53000.1 |
| dipeptidase | SHLA_61c000250 | Not Available | + | 334354 - 335379 | 38032.1 |
| abc-type nitrate/sulfonate/bicarbonate transport system permease component | SHLA_61c000260 | Not Available | + | 335448 - 336263 | 29167.0 |
| abc transporter-like protein | SHLA_61c000270 | Not Available | + | 336274 - 337053 | 28186.2 |
| nmt1/thi5-like family protein 5 | SHLA_61c000280 | Not Available | + | 337076 - 338050 | 34834.4 |
| phytoene dehydrogenase-like protein | SHLA_61c000290 | Not Available | + | 338112 - 339722 | 57475.2 |
| methylmuconolactone isomerase | SHLA_61c000300 | Not Available | + | 339734 - 340027 | 11302.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.