Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | SHLA_61c000110 | Not Available | + | 318637 - 319650 | 37534.8 |
| udp-glucose 4-epimerase exob | SHLA_61c000120 | Not Available | + | 319754 - 320740 | 35156.8 |
| glycosyltransferase | SHLA_61c000130 | Not Available | + | 320737 - 322593 | 69537.7 |
| udp-glucose 6-dehydrogenase rkpk | SHLA_61c000140 | Not Available | + | 322597 - 324030 | 51392.5 |
| hypothetical protein duf995 | SHLA_61c000150 | Not Available | + | 324017 - 324562 | 20265.0 |
| endoglucanase | SHLA_61c000160 | Not Available | + | 324576 - 325514 | 34796.9 |
| hypothetical protein duf995 | SHLA_61c000170 | Not Available | + | 325568 - 326113 | 20338.4 |
| hypothetical protein | SHLA_61c000180 | Not Available | - | 326241 - 326546 | 11131.6 |
| lysr family transcriptional regulator | SHLA_61c000190 | Not Available | - | 327457 - 328428 | 35645.3 |
| abc-type dipeptide transport system periplasmic component | SHLA_61c000200 | Not Available | + | 328591 - 330171 | 56809.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.