Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative integrase/recombinase y4rb | SHLA_134c000060 | Not Available | - | 305636 - 306556 | 35202.9 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_61c000020 | Not Available | - | 307863 - 308591 | 26439.3 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_61c000030 | Not Available | - | 308591 - 309352 | 26206.2 |
| abc-type amino acid transport system periplasmic component | SHLA_61c000040 | Not Available | - | 309423 - 310271 | 30312.6 |
| hypothetical protein | SHLA_61c000050 | Not Available | - | 310336 - 312030 | 61443.8 |
| p-aminobenzoyl-glutamate hydrolase subunit b | SHLA_61c000060 | Not Available | - | 312023 - 313444 | 49230.6 |
| hypothetical protein | SHLA_61c000070 | Not Available | - | 313893 - 314141 | 8557.87 |
| sulfatase | SHLA_61c000080 | Not Available | - | 314270 - 315616 | 49802.3 |
| rna polymerase, sigma-24 subunit, ecf subfamily | SHLA_61c000090 | Not Available | + | 315862 - 316770 | 33864.8 |
| arac-type dna-binding domain-containing protein | SHLA_61c000100 | Not Available | - | 316899 - 318032 | 41581.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.